Impact of Different Exercise Modalities on the Human Gut Microbiome. Bycura D, Santos AC, Shiffer A, Kyman S, Winfree K, Sutliffe J, Pearson T, Sonderegger D, Cope E, Caporaso JG. Sports 2021; 9(2):14.
Phylogenetic farming: Can evolutionary history predict crop rotation via the soil microbiome? Kaplan I, Bokulich NA, Caporaso JG, Enders LS, Ghanem W, Ingerslew KS. Evol Appl. 2020; 13:1984–1999.
The Cancer Microbiome: Distinguishing Direct and Indirect Effects Requires a Systemic View. Xavier JB, Young VB, Skufca J, Ginty F, Testerman T, Pearson AT, Macklin P, Mitchell A, Shmulevich I, Xie L, Caporaso JG, ... Wargo JA. Trends in Cancer 2020; 6(3):192–204.
Reproducible, interactive, scalable and extensible microbiome data science using QIIME 2. Bolyen E, Rideout JR, Dillon MR, ... Caporaso JG. Nat. Biotechnol. 2019; 37:852–857.
Ultra-high-throughput microbial community analysis on the Illumina HiSeq and MiSeq platforms. Caporaso JG, Lauber CL, Walters WA, Berg-Lyons D, Huntley J, Fierer N, Owens SM, Betley J, Fraser L, Bauer M, Gormley N, Gilbert JA, Smith G, Knight R. ISME J. 2012; 6:1621–1624.